Friday, February 25, 2011

Autoimmune DBP

Savova reported that the new cTAKES pipeline is up and running against the production system.

Plenge reported on the state on the new RA datamart.

Liao has finished the chart reviews of a random sample of the 4500 RA patients. 10% had coronary artery disease. Of that 10%, 41% have definite CAD and 27% have probable CAD.

Feena provided an update on the sequencing project: 500 cases and 650 controls. Discussed a lot of the travails of de-"noising" and de-"batching" the variation found in the pooled samples (done without barcoding).

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